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The genetics and evolutionary dynamics of sexual system evolution in tadpole shrimps (2013)
Thesis
Mathers, T. C. (2013). The genetics and evolutionary dynamics of sexual system evolution in tadpole shrimps. (Thesis). University of Hull. Retrieved from https://hull-repository.worktribe.com/output/4216243

Sexual reproduction is found throughout the eukaryote tree of life and fundamentally affects the organisms that practice it. In particular, the sexual system of an organism can influence genetic diversity, population structure, genome structure, the... Read More about The genetics and evolutionary dynamics of sexual system evolution in tadpole shrimps.

Functional rare males in diploid parthenogenetic Artemia (2013)
Journal Article
Maccari, M., Gómez, A., Hontoria, F., & Amat, F. (2013). Functional rare males in diploid parthenogenetic Artemia. Journal of evolutionary biology, 26(9), 1934-1948. https://doi.org/10.1111/jeb.12191

Functional males that are produced occasionally in some asexual taxa - called 'rare males' - raise considerable evolutionary interest, as they might be involved in the origin of new parthenogenetic lineages. Diploid parthenogenetic Artemia produce ra... Read More about Functional rare males in diploid parthenogenetic Artemia.

Multiple global radiations in tadpole shrimps challenge the concept of 'living fossils' (2013)
Journal Article
Mathers, T. C., Hammond, R. L., Jenner, R. A., Hänfling, B., & Gomez, A. (2013). Multiple global radiations in tadpole shrimps challenge the concept of 'living fossils'. PeerJ, 1, e62. https://doi.org/10.7717/peerj.62

‘Living fossils’, a phrase first coined by Darwin, are defined as species with limited recent diversification and high morphological stasis over long periods of evolutionary time. Morphological stasis, however, can potentially lead to diversification... Read More about Multiple global radiations in tadpole shrimps challenge the concept of 'living fossils'.

High lability of sexual system over 250 million years of evolution in morphologically conservative tadpole shrimps (2013)
Journal Article
Mathers, T. C., Jenner, R. A., Zierold, T., Hammond, R. L., Hänfling, B., & Gomez, A. (2013). High lability of sexual system over 250 million years of evolution in morphologically conservative tadpole shrimps. BMC evolutionary biology, 13(1), 30. https://doi.org/10.1186/1471-2148-13-30

Background Sexual system is a key factor affecting the genetic diversity, population structure, genome structure and the evolutionary potential of species. The sexual system androdioecy – where males and hermaphrodites coexist in populations – is ext... Read More about High lability of sexual system over 250 million years of evolution in morphologically conservative tadpole shrimps.

Widespread secondary contact and new glacial refugia in the Halophilic Rotifer Brachionus Plicatilis in the Iberian Peninsula (2011)
Journal Article
Campillo, S., Serra, M., Carmona, M. J., & Gómez, A. (2011). Widespread secondary contact and new glacial refugia in the Halophilic Rotifer Brachionus Plicatilis in the Iberian Peninsula. PLoS ONE, 6(6), e20986. https://doi.org/10.1371/journal.pone.0020986

Small aquatic organisms harbour deep phylogeographic patterns and highly structured populations even at local scales. These patterns indicate restricted gene flow, despite these organisms' high dispersal abilities, and have been explained by a combin... Read More about Widespread secondary contact and new glacial refugia in the Halophilic Rotifer Brachionus Plicatilis in the Iberian Peninsula.

Long-term coexistence of rotifer cryptic species (2011)
Journal Article
Montero-Pau, J., Ramos-Rodríguez, E., Serra, M., & Gómez, A. (2011). Long-term coexistence of rotifer cryptic species. PLoS ONE, 6(6), Article ARTN e21530. https://doi.org/10.1371/journal.pone.0021530

Despite their high morphological similarity, cryptic species often coexist in aquatic habitats presenting a challenge in the framework of niche differentiation theory and coexistence mechanisms. Here we use a rotifer species complex inhabiting highly... Read More about Long-term coexistence of rotifer cryptic species.

Development of genomic resources for the phylogenetic analysis of the Brachionus plicatilis species complex (Rotifera: Monogononta) (2010)
Journal Article
Montero-Pau, J., & Gómez, A. (2011). Development of genomic resources for the phylogenetic analysis of the Brachionus plicatilis species complex (Rotifera: Monogononta). Hydrobiologia, 662(1), 43-50. https://doi.org/10.1007/s10750-010-0485-3

There has been a substantial leap forward in the quantity and quality of genomic resources available for research on rotifers in recent years. We used available genomic and bioinformatics resources to identify variable regions of the genome to design... Read More about Development of genomic resources for the phylogenetic analysis of the Brachionus plicatilis species complex (Rotifera: Monogononta).

Evolutionary origin and phylogeography of the diploid obligate parthenogen Artemia parthenogenetica (Branchiopoda: Anostraca) (2010)
Journal Article
Muñoz, J., Gomez, A., Green, A. J., Figuerola, J., Amat, F., & Rico, C. (2010). Evolutionary origin and phylogeography of the diploid obligate parthenogen Artemia parthenogenetica (Branchiopoda: Anostraca). PLoS ONE, 5(8), e11932. https://doi.org/10.1371/journal.pone.0011932

Background: Understanding the evolutionary origin and the phylogeographic patterns of asexual taxa can shed light on the origin and maintenance of sexual reproduction. We assessed the geographic origin, genetic diversity, and phylogeographic history... Read More about Evolutionary origin and phylogeography of the diploid obligate parthenogen Artemia parthenogenetica (Branchiopoda: Anostraca).

Selection on life-history traits and genetic population divergence in rotifers (2009)
Journal Article
Campillo, S., GarcÍa-Roger, E. M., Carmona, M. J., Gomez, A., & Serra, M. (2009). Selection on life-history traits and genetic population divergence in rotifers. Journal of evolutionary biology, 22(12), 2542-2553. https://doi.org/10.1111/j.1420-9101.2009.01871.x

A combination of founder effects and local adaptation - the Monopolization hypothesis - has been proposed to reconcile the strong population differentiation of zooplankton dwelling in ponds and lakes and their high dispersal abilities. The role genet... Read More about Selection on life-history traits and genetic population divergence in rotifers.

Sex ratio, reproductive mode and genetic diversity in Triops cancriformis (2009)
Journal Article
Zierold, T., Montero-Pau, J., Hänfling, B., & Gómez, A. (2009). Sex ratio, reproductive mode and genetic diversity in Triops cancriformis. Freshwater biology, 54(7), 1392-1405. https://doi.org/10.1111/j.1365-2427.2009.02191.x

1. Aquatic invertebrates display a wide array of alternative reproductive modes from apomixis to hermaphroditism and cyclical parthenogenesis. These have important effects on genetic diversity and population structure. Populations of the 'living foss... Read More about Sex ratio, reproductive mode and genetic diversity in Triops cancriformis.

Phylogeography and local endemism of the native Mediterranean brine shrimp Artemia salina (Branchiopoda : Anostraca) (2008)
Journal Article
Muñoz, J., Gómez, A., Green, A. J., Figuerola, J., Amat, F., & Rico, C. (2008). Phylogeography and local endemism of the native Mediterranean brine shrimp Artemia salina (Branchiopoda : Anostraca). Molecular ecology, 17(13), 3160-3177. https://doi.org/10.1111/j.1365-294X.2008.03818.x

There has been a recent appreciation of the ecological impacts of zooplanktonic species invasions. The North American brine shrimp Artemia franciscana is one such alien invader in hyper-saline water ecosystems at a global scale. It has been shown to... Read More about Phylogeography and local endemism of the native Mediterranean brine shrimp Artemia salina (Branchiopoda : Anostraca).

Application of an inexpensive and high-throughput genomic DNA extraction method for the molecular ecology of zooplanktonic diapausing eggs (2008)
Journal Article
Montero-Pau, J., Gómez, A., & Muñoz, J. (2008). Application of an inexpensive and high-throughput genomic DNA extraction method for the molecular ecology of zooplanktonic diapausing eggs. Limnology and oceanography, methods ASLO, 6(6), 218-222. https://doi.org/10.4319/lom.2008.6.218

We describe the application of a simple, low-cost, and effective method of DNA extraction ( hot sodium hydroxide and Tris, HotSHOT) to the diapausing propagules of continental aquatic invertebrates for its use in PCR amplification. We illustrate the... Read More about Application of an inexpensive and high-throughput genomic DNA extraction method for the molecular ecology of zooplanktonic diapausing eggs.

Global isolation by distance despite strong regional phylogeography in a small metazoan (2007)
Journal Article
Mills, S., Lunt, D. H., & Gómez, A. (2007). Global isolation by distance despite strong regional phylogeography in a small metazoan. BMC evolutionary biology, 7, Article 225. https://doi.org/10.1186/1471-2148-7-225

Background: Small vagile eukaryotic organisms, which comprise a large proportion of the Earth's biodiversity, have traditionally been thought to lack the extent of population structuring and geographic speciation observed in larger taxa. Here we inve... Read More about Global isolation by distance despite strong regional phylogeography in a small metazoan.

Recent evolution of alternative reproductive modes in the 'living fossil' Triops cancriformis (2007)
Journal Article
Zierold, T., Haenfling, B., & Gomez, A. (2007). Recent evolution of alternative reproductive modes in the 'living fossil' Triops cancriformis. BMC evolutionary biology, 7(161), 1-12. https://doi.org/10.1186/1471-2148-7-161

Background: The Notostraca is a small but ancient crustacean order with a contrasting combination of a conservative morphology and a wide range of reproductive modes. The tadpole shrimp Triops cancriformis, includes bisexual - the putatively ancestra... Read More about Recent evolution of alternative reproductive modes in the 'living fossil' Triops cancriformis.

Persistent genetic signatures of colonization in Brachionus manjavacas rotifers in the Iberian Peninsula (2007)
Journal Article
Gomez, A., Montero-Pau, J., Lunt, D. H., Serra, M., & Campillo, S. (2007). Persistent genetic signatures of colonization in Brachionus manjavacas rotifers in the Iberian Peninsula. Molecular ecology, 16(15), 3228-3240. https://doi.org/10.1111/j.1365-294X.2007.03372.x

Recent phylogeographical assessments have consistently shown that continental zooplankton display high levels of population subdivision, despite the high dispersal capacity of their diapausing propagules. As such, there is an apparent paradox between... Read More about Persistent genetic signatures of colonization in Brachionus manjavacas rotifers in the Iberian Peninsula.

Mitochondrial DNA phylogeography and mating compatibility reveal marked genetic structuring and speciation in the NE Atlantic bryozoan Celleporella hyalina (2007)
Journal Article
Gomez, A., Hughes, R. N., Wright, P. J., Carvalho, G. R., & Lunt, D. H. (2007). Mitochondrial DNA phylogeography and mating compatibility reveal marked genetic structuring and speciation in the NE Atlantic bryozoan Celleporella hyalina. Molecular ecology, 16(10), 2173-2188. https://doi.org/10.1111/j.1365-294X.2007.03308.x

The marine bryozoan Celleporella hyalina is a species complex composed of many highly divergent and mostly allopatric genetic lineages that are reproductively isolated but share a remarkably similar morphology. One such lineage commonly encrusts macr... Read More about Mitochondrial DNA phylogeography and mating compatibility reveal marked genetic structuring and speciation in the NE Atlantic bryozoan Celleporella hyalina.

Mating trials validate the use of DNA barcoding to reveal cryptic speciation of a marine bryozoan taxon (2007)
Journal Article
Gómez, A., Wright, P. J., Lunt, D. H., Cancino, J. M., Carvalho, G. R., & Hughes, R. N. (2007). Mating trials validate the use of DNA barcoding to reveal cryptic speciation of a marine bryozoan taxon. Proceedings of the Royal Society B: Biological Sciences, 274(1607), 199-207. https://doi.org/10.1098/rspb.2006.3718

Despite increasing threats to the marine environment, only a fraction of the biodiversity of the oceans has been described, owing in part to the widespread occurrence of cryptic species. DNA-based barcoding through screening of an orthologous referen... Read More about Mating trials validate the use of DNA barcoding to reveal cryptic speciation of a marine bryozoan taxon.

Mitochondrial DNA phylogeography of the Mesoamerican spiny-tailed lizards (Ctenosaura quinquecarinata complex): Historical biogeography, species status and conservation (2005)
Journal Article
Hasbún, C. R., Gomez, A., Köhler, G., & Lunt, D. H. (2005). Mitochondrial DNA phylogeography of the Mesoamerican spiny-tailed lizards (Ctenosaura quinquecarinata complex): Historical biogeography, species status and conservation. Molecular ecology, 14(10), 3095-3107. https://doi.org/10.1111/j.1365-294x.2005.02665.x

Through the examination of past and present distributions of plants and animals, historical biogeographers have provided many insights on the dynamics of the massive organismal exchange between North and South America. However, relatively few phyloge... Read More about Mitochondrial DNA phylogeography of the Mesoamerican spiny-tailed lizards (Ctenosaura quinquecarinata complex): Historical biogeography, species status and conservation.

Behavioral reproductive isolation among sympatric strains of Brachionus plicatilis Müller 1786: insights into the status of this taxonomic species (1995)
Journal Article
Gomez, A., & Serra, M. (1995). Behavioral reproductive isolation among sympatric strains of Brachionus plicatilis Müller 1786: insights into the status of this taxonomic species. Hydrobiologia, 313-314(1), 111-119. https://doi.org/10.1007/bf00025938

We present results on cross-mating experiments using Brachionus plicatilis strains collected in three ponds of a coastal marsh (Torreblanca Marsh, Castellón, Spain). These strains were known to differ widely both in morphology and allozyme patterns f... Read More about Behavioral reproductive isolation among sympatric strains of Brachionus plicatilis Müller 1786: insights into the status of this taxonomic species.