Open data and digital morphology

Davies, Thomas G.; Rahman, Imran A.; Lautenschlager, Stephan; Cunningham, John A.; Asher, Robert J.; Barrett, Paul M.; Bates, Karl T.; Bengtson, Stefan; Benson, Roger B. J.; Boyer, Doug M.; Braga, José; Bright, Jen A.; Claessens, Leon P. A. M.; Cox, Philip G.; Dong, Xi Ping; Evans, Alistair R.; Falkingham, Peter L.; Friedman, Matt; Garwood, Russell J.; Goswami, Anjali; Hutchinson, John R.; Jeffery, Nathan S.; Johanson, Zerina; Lebrun, Renaud; Martínez-Pérez, Carlos; Marugán-Lobón, Jesús; O'Higgins, Paul M.; Metscher, Brian; Orliac, Maëva; Rowe, Timothy B.; Rücklin, Martin; Sánchez-Villagra, Marcelo R.; Shubin, Neil H.; Smith, Selena Y.; Starck, J. Matthias; Stringer, Chris; Summers, Adam P.; Sutton, Mark D.; Walsh, Stig A.; Weisbecker, Vera; Witmer, Lawrence M.; Wroe, Stephen; Yin, Zongjun; Rayfield, Emily J.; Donoghue, Philip C. J.

Abstract

Over the past two decades, the development of methods for visualizing and analysing specimens digitally, in three and even four dimensions, has transformed the study of living and fossil organisms. However, the initial promise that the widespread application of such methods would facilitate access to the underlying digital data has not been fully achieved. The underlying datasets for many published studies are not readily or freely available, introducing a barrier to verification and reproducibility, and the reuse of data. There is no current agreement or policy on the amount and type of data that should be made available alongside studies that use, and in some cases are wholly reliant on, digital morphology. Here, we propose a set of recommendations for minimum standards and additional best practice for three-dimensional digital data publication, and review the issues around data storage, management and accessibility.

Citation

Davies, T. G., Rahman, I. A., Lautenschlager, S., Cunningham, J. A., Asher, R. J., Barrett, P. M., Bates, K. T., Bengtson, S., Benson, R. B. J., Boyer, D. M., Braga, J., Bright, J. A., Claessens, L. P. A. M., Cox, P. G., Dong, X. P., Evans, A. R., Falkingham, P. L., Friedman, M., Garwood, R. J., Goswami, A., …Donoghue, P. C. J. (2017). Open data and digital morphology. Proceedings of the Royal Society B: Biological Sciences, 284(1852), https://doi.org/10.1098/rspb.2017.0194

• Journal Article Type: Article
• Acceptance Date: Mar 10, 2017
• Online Publication Date: Apr 12, 2017
• Publication Date: Apr 12, 2017
• Deposit Date: Nov 28, 2019
• Publicly Available Date: Dec 2, 2019
• Journal: Proceedings of the Royal Society B: Biological Sciences
• Print ISSN: 0962-8452
• Electronic ISSN: 1471-2954
• Publisher: The Royal Society
• Peer Reviewed: Peer Reviewed
• Volume: 284
• Issue: 1852
• DOI: https://doi.org/10.1098/rspb.2017.0194
• Public URL: https://hull-repository.worktribe.com/output/3267734
• Additional Information: Received: 2017-01-30; Accepted: 2017-03-10; Published: 2017-04-12
• Contract Date: Nov 28, 2019