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Restoring river connectivity: Prioritizing passage improvements for diadromous fishes and lampreys (2012)
Journal Article
Cowx, I. G., & Nunn, A. D. (2012). Restoring river connectivity: Prioritizing passage improvements for diadromous fishes and lampreys. AMBIO: A Journal of the Human Environment, 41(4), 402-409. https://doi.org/10.1007/s13280-012-0281-6

Physical obstructions are becoming increasingly recognized as major factors influencing the migrations, population structures, spawning success and recruitment of freshwater organisms. This paper presents a simple but effective method, intended for u... Read More about Restoring river connectivity: Prioritizing passage improvements for diadromous fishes and lampreys.

Improving the validation of finite element models with quantitative full-field strain comparisons (2012)
Journal Article
Gröning, F., Bright, J. A., Fagan, M. J., & O'Higgins, P. (2012). Improving the validation of finite element models with quantitative full-field strain comparisons. Journal of biomechanics, 45(8), 1498-1506. https://doi.org/10.1016/j.jbiomech.2012.02.009

The techniques used to validate finite element (FE) models against experimental results have changed little during the last decades, even though the traditional approach of using single point measurements from strain gauges has major limitations: the... Read More about Improving the validation of finite element models with quantitative full-field strain comparisons.

The robustness and restoration of a network of ecological networks (2012)
Journal Article
Pocock, M. J., Evans, D. M., & Memmott, J. (2012). The robustness and restoration of a network of ecological networks. Science, 335(6071), 973-977. https://doi.org/10.1126/science.1214915

Understanding species' interactions and the robustness of interaction networks to species loss is essential to understand the effects of species' declines and extinctions. In most studies, different types of networks (such as food webs, parasitoid we... Read More about The robustness and restoration of a network of ecological networks.

The importance of craniofacial sutures in biomechanical finite element models of the domestic pig (2012)
Journal Article
Bright, J. A. (2012). The importance of craniofacial sutures in biomechanical finite element models of the domestic pig. PLoS ONE, 7(2), e31769. https://doi.org/10.1371/journal.pone.0031769

Craniofacial sutures are a ubiquitous feature of the vertebrate skull. Previous experimental work has shown that bone strain magnitudes and orientations often vary when moving from one bone to another, across a craniofacial suture. This has led to th... Read More about The importance of craniofacial sutures in biomechanical finite element models of the domestic pig.

Transcriptional responses of cancer-related genes in turbot Scophthalmus maximus and mussels Mytilus edulis exposed to heavy fuel oil no. 6 and styrene (2012)
Journal Article
Ruiz, P., Orbea, A., Rotchell, J. M., & Cajaraville, M. P. (2012). Transcriptional responses of cancer-related genes in turbot Scophthalmus maximus and mussels Mytilus edulis exposed to heavy fuel oil no. 6 and styrene. Ecotoxicology, 21(3), 820-831. https://doi.org/10.1007/s10646-011-0843-6

Recent spills in European waters have released polycyclic aromatic hydrocarbons, important components of heavy fuel oil, and the hydrocarbon styrene. Heavy fuel oil and styrene are classified as potentially genotoxic and carcinogenic. Here we investi... Read More about Transcriptional responses of cancer-related genes in turbot Scophthalmus maximus and mussels Mytilus edulis exposed to heavy fuel oil no. 6 and styrene.

Reference gene selection for qPCR in mussel, Mytilus edulis, during gametogenesis and exogenous estrogen exposure (2012)
Journal Article
Cubero-Leon, E., Ciocan, C. M., Minier, C., & Rotchell, J. M. (2012). Reference gene selection for qPCR in mussel, Mytilus edulis, during gametogenesis and exogenous estrogen exposure. Environmental science and pollution research, 19(7), 2728-2733. https://doi.org/10.1007/s11356-012-0772-9

Purpose: The aim of this study is to develop a normalization method for real-time PCR data by analyzing the most stably expressed control genes in mussel (Mytilus edulis) reproductive tissue. Methods: To facilitate this, six candidate genes, includin... Read More about Reference gene selection for qPCR in mussel, Mytilus edulis, during gametogenesis and exogenous estrogen exposure.

Social network correlates of food availability in an endangered population of killer whales, Orcinus orca (2012)
Journal Article
Foster, E. A., Franks, D. W., Morrell, L., Balcomb, K. C., Parsons, K. M., van Ginneken, A., & Croft, D. P. (2012). Social network correlates of food availability in an endangered population of killer whales, Orcinus orca. Animal behaviour, 83(3), 731-736. https://doi.org/10.1016/j.anbehav.2011.12.021

For the majority of social species, group composition is dynamic, and individuals are interconnected in a heterogeneous social network. Social network structure has far-reaching implications for the ecology of individuals and populations. However, we... Read More about Social network correlates of food availability in an endangered population of killer whales, Orcinus orca.

Volatile amphibian pheromones: Macrolides from mantellid frogs from madagascar (2012)
Journal Article
Poth, D., Wollenberg, K. C., Vences, M., & Schulz, S. (2012). Volatile amphibian pheromones: Macrolides from mantellid frogs from madagascar. Angewandte Chemie, 51(9), 2187-2190. https://doi.org/10.1002/anie.201106592

Amphibians like water, but do they also notice volatile compounds in the air? Yes, they do. Macrolides, such as phoracantholide-J (see picture; upper right structure) or the newly discovered natural product gephyromantolide-A (left structure), are us... Read More about Volatile amphibian pheromones: Macrolides from mantellid frogs from madagascar.

Ecological constraints on mammalian sleep architecture (2012)
Book Chapter
Preston, B., Nunn, C., McNamara, P., Barton, R., & Capellini, I. (2012). Ecological constraints on mammalian sleep architecture. In Evolution of Sleep. Phylogenetic and functional perspectives (12389). Cambridge University Press

In this chapter, we review the evidence for how ecological factors, including predation risk and foraging requirements, might shape patterns of sleep among mammals. We also highlight the need for more research on the degree to which animals can exhib... Read More about Ecological constraints on mammalian sleep architecture.

Sorting out lalos: Description of new species and additional taxonomic data on megophryid frogs from northern Indochina (genus Leptolalax, Megophryidae, Anura) (2011)
Journal Article
Ohler, A., Wollenberg, K. C., Grosjean, S., Hendrix, R., Vences, M., Ziegler, T., & Dubois, A. (2011). Sorting out lalos: Description of new species and additional taxonomic data on megophryid frogs from northern Indochina (genus Leptolalax, Megophryidae, Anura). Zootaxa, 3147(1), 1-83. https://doi.org/10.11646/zootaxa.3147.1.1

Frogs in the subgenus Lalos of the genus Leptolalax (Megophryidae) are highly diversified in continental Asia and consist of about 17 nominal species. These frogs are small, inconspicuous, and of high superficial morphological similarity. We here for... Read More about Sorting out lalos: Description of new species and additional taxonomic data on megophryid frogs from northern Indochina (genus Leptolalax, Megophryidae, Anura).

Nidicolous tadpoles rather than direct development in Malagasy frogs of the genus Gephyromantis (2011)
Journal Article
Randrianiaina, R. D., Wollenberg, K. C., Hiobiarilanto, T. R., Strauß, A., Glos, J., & Vences, M. (2011). Nidicolous tadpoles rather than direct development in Malagasy frogs of the genus Gephyromantis. Journal of Natural History, 45(47-48), 2871-2900. https://doi.org/10.1080/00222933.2011.596952

Frogs in the genus Gephyromantis from Madagascar were assumed to have a direct developmental mode, i.e. the complete embryonic and larval development within the egg, but recently free-swimming, exotrophic tadpoles of a few species have been found. He... Read More about Nidicolous tadpoles rather than direct development in Malagasy frogs of the genus Gephyromantis.

Serum proteomic profiling reveals that pretreatment complement protein levels are predictive of esophageal cancer patient response to neoadjuvant chemoradiation (2011)
Presentation / Conference Contribution
Maher, S. G., McDowell, D. T., Collins, B. C., Muldoon, C., Gallagher, W. M., & Reynolds, J. V. (2011). Serum proteomic profiling reveals that pretreatment complement protein levels are predictive of esophageal cancer patient response to neoadjuvant chemoradiation. Annals of Surgery, 254(5), 809-816. https://doi.org/10.1097/SLA.0b013e31823699f2

OBJECTIVE: To identify serum-based biomarkers predicting response to neoadjuvant chemoradiotherapy (neo-CRT) in esophageal cancer. PURPOSE: Increasingly, the standard of care for esophageal cancer involves neo-CRT followed by surgery. The identificat... Read More about Serum proteomic profiling reveals that pretreatment complement protein levels are predictive of esophageal cancer patient response to neoadjuvant chemoradiation.

Dynamic nuclear polarization-enhanced solid-state NMR of a 13C-labeled signal peptide bound to lipid-reconstituted sec translocon (2011)
Journal Article
Reggie, L., Lopez, J. J., Collinson, I., Glaubitz, C., & Lorch, M. (2011). Dynamic nuclear polarization-enhanced solid-state NMR of a 13C-labeled signal peptide bound to lipid-reconstituted sec translocon. Journal of the American Chemical Society, 133(47), 19084-19086. https://doi.org/10.1021/ja209378h

Dynamic nuclear polarization (DNP) has made it possible to record 2D double-quantum-filtered (DQF) solid-state NMR (ssNMR) spectra of a signal peptide bound to a lipid-reconstituted SecYEG translocon complex. The small quantity of peptide in the sampl... Read More about Dynamic nuclear polarization-enhanced solid-state NMR of a 13C-labeled signal peptide bound to lipid-reconstituted sec translocon.

The foraging ecology of larval and juvenile fishes (2011)
Journal Article
Nunn, A. D., Tewson, L. H., & Cowx, I. G. (2012). The foraging ecology of larval and juvenile fishes. Reviews in Fish Biology and Fisheries, 22(2), 377-408. https://doi.org/10.1007/s11160-011-9240-8

Knowledge of the foraging ecology of fishes is fundamental both to understanding the processes that function at the individual, population and community levels, and for the management and conservation of their populations and habitats. Furthermore, t... Read More about The foraging ecology of larval and juvenile fishes.

Age and reproductive investment in grass goby females in the Venice lagoon (2011)
Journal Article
Franco, A., Malavasi, S., Pranovi, F., Franzoi, P., & Torricelli, P. (2012). Age and reproductive investment in grass goby females in the Venice lagoon. Environmental Biology of Fishes, 93(3), 419-425. https://doi.org/10.1007/s10641-011-9931-y

The present work describes the relationship between age and reproductive investment in the grass goby females in the Venice Lagoon. Age was estimated by otoliths reading, while reproductive investment was assessed by either the relative number of mat... Read More about Age and reproductive investment in grass goby females in the Venice lagoon.

Inferring the origin of populations introduced from a genetically structured native range by approximate Bayesian computation: case study of the invasive ladybird Harmonia axyridis. (2011)
Journal Article
Lombaert, E., Guillemaud, T., Thomas, C. E., Lawson Handley, L. J., Li, J., Wang, S., Pang, H., Goryacheva, I., Zakharov, I. A., Jousselin, E., Poland, R. L., Migeon, A., Van Lenteren, J., De Clercq, P., Berkvens, N., Jones, W., & Estoup, A. (2011). Inferring the origin of populations introduced from a genetically structured native range by approximate Bayesian computation: case study of the invasive ladybird Harmonia axyridis. Molecular ecology, 20(22), 4654-4670. https://doi.org/10.1111/j.1365-294X.2011.05322.x

Correct identification of the source population of an invasive species is a prerequisite for testing hypotheses concerning the factors responsible for biological invasions. The native area of invasive species may be large, poorly known and/or genetic... Read More about Inferring the origin of populations introduced from a genetically structured native range by approximate Bayesian computation: case study of the invasive ladybird Harmonia axyridis..

Molecular toxicology of corals: A review (2011)
Journal Article
Rotchell, J. M., & Ostrander, G. K. (2011). Molecular toxicology of corals: A review. Journal of Toxicology and Environmental Health, Part B: Critical Reviews, 14(8), 571-592. https://doi.org/10.1080/10937404.2011.615112

Coral reefs worldwide have become increasingly affected by a phenomenon known as "coral bleaching," the loss of the symbiotic algae from the host corals. The underlying causes and mechanism(s) of coral bleaching are not well known, although several h... Read More about Molecular toxicology of corals: A review.

Molecular phylogeny and biogeography of Malagasy frogs of the genus Gephyromantis (2011)
Journal Article
Kaffenberger, N., Wollenberg, K. C., Köhler, J., Glaw, F., Vieites, D. R., & Vences, M. (2012). Molecular phylogeny and biogeography of Malagasy frogs of the genus Gephyromantis. Molecular Phylogenetics and Evolution, 62(1), 555-560. https://doi.org/10.1016/j.ympev.2011.09.023

The genus Gephyromantis is a clade within the Malagasy-Comoroan family Mantellidae composed of rainforest frogs that live and breed to varying degrees independently from water. Based on DNA sequences of five mitochondrial and five nuclear genes we in... Read More about Molecular phylogeny and biogeography of Malagasy frogs of the genus Gephyromantis.