All Outputs (724)

The Student Thesis Conference as a model for authentic and inclusive student research dissemination (2018)
Journal Article
Douglas, C., Yearsley, J., Scott, G. W., & Hubbard, K. E. (2018). The Student Thesis Conference as a model for authentic and inclusive student research dissemination. Higher Education Pedagogies, 3(1), 319-341. https://doi.org/10.1080/23752696.2018.1478675

Engaging in a final year project is required in most undergraduate degree programmes. However, the student research experience often differs from the academic experience due to a lack of opportunities for research dissemination. We present the Studen... Read More about The Student Thesis Conference as a model for authentic and inclusive student research dissemination.

Construction, validation, and application of nocturnal pollen transport networks in an agro-ecosystem: a comparison using light microscopy and DNA metabarcoding (2018)
Journal Article
Macgregor, C. J., Kitson, J. J., Fox, R., Hahn, C., Lunt, D. H., Pocock, M. J., & Evans, D. M. (2019). Construction, validation, and application of nocturnal pollen transport networks in an agro-ecosystem: a comparison using light microscopy and DNA metabarcoding. Ecological entomology, 44(1), 17-29. https://doi.org/10.1111/een.12674

1. Moths are globally relevant as pollinators but nocturnal pollination remains poorly understood. Plant–pollinator interaction networks are traditionally constructed using either flower‐visitor observations or pollen‐transport detection using micros... Read More about Construction, validation, and application of nocturnal pollen transport networks in an agro-ecosystem: a comparison using light microscopy and DNA metabarcoding.

Upstream passage of adult sea trout (Salmo trutta) at a low-head weir with an Archimedean screw hydropower turbine and co-located fish pass (2018)
Journal Article
Dodd, J. R., Bolland, J. D., Hateley, J., Cowx, I. G., Walton, S. E., Cattaneo, M. E. G. V., & Noble, R. A. A. (2018). Upstream passage of adult sea trout (Salmo trutta) at a low-head weir with an Archimedean screw hydropower turbine and co-located fish pass. Marine and Freshwater Research, 69(12), 1822-1833. https://doi.org/10.1071/MF18125

© 2018 CSIRO. The exploitation of riverine systems for renewable energy has resulted in large numbers of small-scale hydropower schemes on low-head weirs. Although considered a clean and 'green' energy source in terms of emissions, hydropower can aff... Read More about Upstream passage of adult sea trout (Salmo trutta) at a low-head weir with an Archimedean screw hydropower turbine and co-located fish pass.

Free-sustaining three-dimensional S235 steel-based porous electrocatalyst for highly efficient and durable oxygen evolution (2018)
Journal Article
Han, W., Kuepper, K., Hou, P., Akram, W., Eickmeier, H., Hardege, J., Steinhart, M., & Schäfer, H. (2018). Free-sustaining three-dimensional S235 steel-based porous electrocatalyst for highly efficient and durable oxygen evolution. ChemSusChem, 11(20), 3661-3671. https://doi.org/10.1002/cssc.201801351

A novel oxygen evolution reaction (OER) catalyst (3D S235-P steel) based on steel S235 substrate has been successfully prepared via a facile one-step surface modification. The standard Carbon Manganese steel was phosphorizated superficially leading t... Read More about Free-sustaining three-dimensional S235 steel-based porous electrocatalyst for highly efficient and durable oxygen evolution.

Prospects and challenges of environmental DNA (eDNA) monitoring in freshwater ponds (2018)
Journal Article
Harper, L. R., Buxton, A. S., Rees, H. C., Bruce, K., Brys, R., Halfmaerten, D., Read, D. S., Watson, H. V., Sayer, C. D., Jones, E. P., Priestley, V., Mächler, E., Múrria, C., Garcés-Pastor, S., Medupin, C., Burgess, K., Benson, G., Boonham, N., Griffiths, R. A., Lawson Handley, L., & Hänfling, B. (2019). Prospects and challenges of environmental DNA (eDNA) monitoring in freshwater ponds. Hydrobiologia, 826(1), 25-41. https://doi.org/10.1007/s10750-018-3750-5

© 2018, The Author(s). Environmental DNA (eDNA) analysis is a rapid, non-invasive, cost-efficient biodiversity monitoring tool with enormous potential to inform aquatic conservation and management. Development is ongoing, with strong commercial inter... Read More about Prospects and challenges of environmental DNA (eDNA) monitoring in freshwater ponds.

The genomic basis of color pattern polymorphism in the Harlequin ladybird (2018)
Journal Article
Gautier, M., Yamaguchi, J., Foucaud, J., Loiseau, A., Ausset, A., Facon, B., Gschloessl, B., Lagnel, J., Loire, E., Parrinello, H., Severac, D., Lopez-Roques, C., Donnadieu, C., Manno, M., Berges, H., Gharbi, K., Lawson-Handley, L., Zang, L.-S., Vogel, H., Estoup, A., & Prud'homme, B. (2018). The genomic basis of color pattern polymorphism in the Harlequin ladybird. Current biology : CB, 28(20), 3296-3302.e7. https://doi.org/10.1016/j.cub.2018.08.023

© 2018 The Authors Many animal species comprise discrete phenotypic forms. A common example in natural populations of insects is the occurrence of different color patterns, which has motivated a rich body of ecological and genetic research [1–6]. The... Read More about The genomic basis of color pattern polymorphism in the Harlequin ladybird.

Correlates of rate heterogeneity in avian ecomorphological traits (2018)
Journal Article
Chira, A. M., Cooney, C. R., Bright, J. A., Capp, E. J. R., Hughes, E. C., Moody, C. J. A., Nouri, L. O., Varley, Z. K., & Thomas, G. H. (2018). Correlates of rate heterogeneity in avian ecomorphological traits. Ecology letters, 21(10), 1505-1514. https://doi.org/10.1111/ele.13131

Heterogeneity in rates of trait evolution is widespread, but it remains unclear which processes drive fast and slow character divergence across global radiations. Here, we test multiple hypotheses for explaining rate variation in an ecomorphological... Read More about Correlates of rate heterogeneity in avian ecomorphological traits.

Circadian oscillations of cytosolic free calcium regulate the Arabidopsis circadian clock (2018)
Journal Article
Martí Ruiz, M. C., Hubbard, K. E., Gardner, M. J., Jung, H. J., Aubry, S., Hotta, C. T., Mohd-Noh, N. I., Robertson, F. C., Hearn, T. J., Tsai, Y.-C., Dodd, A. N., Hannah, M., Carré, I. A., Davies, J. M., Braam, J., & Webb, A. A. (2018). Circadian oscillations of cytosolic free calcium regulate the Arabidopsis circadian clock. Nature Plants, 4(9), 690-698. https://doi.org/10.1038/s41477-018-0224-8

In the last decade, the view of circadian oscillators has expanded from transcriptional feedback to incorporate post-transcriptional, post-translational, metabolic processes and ionic signalling. In plants and animals, there are circadian oscillation... Read More about Circadian oscillations of cytosolic free calcium regulate the Arabidopsis circadian clock.

Crop pests and predators exhibit inconsistent responses to surrounding landscape composition (2018)
Journal Article
Karp, D. S., Chaplin-Kramer, R., Meehan, T. D., Martin, E. A., DeClerck, F., Grab, H., Gratton, C., Hunt, L., Larsen, A. E., Martínez-Salinas, A., O’Rourke, M. E., Rusch, A., Poveda, K., Jonsson, M., Rosenheim, J. A., Schellhorn, N. A., Tscharntke, T., Wratten, S. D., Zhang, W., Iverson, A. L., …Zou, Y. (2018). Crop pests and predators exhibit inconsistent responses to surrounding landscape composition. Proceedings of the National Academy of Sciences of the United States of America, 115(33), E7863-E7870. https://doi.org/10.1073/pnas.1800042115

The idea that noncrop habitat enhances pest control and represents a win–win opportunity to conserve biodiversity and bolster yields has emerged as an agroecological paradigm. However, while noncrop habitat in landscapes surrounding farms sometimes b... Read More about Crop pests and predators exhibit inconsistent responses to surrounding landscape composition.

Small Water Bodies in Great Britain and Ireland: Ecosystem function, human-generated degradation, and options for restorative action (2018)
Journal Article
Riley, W. D., Potter, E. C., Biggs, J., Collins, A. L., Jarvie, H. P., Jones, J. I., Kelly-Quinn, M., Ormerod, S. J., Sear, D. A., Wilby, R. L., Broadmeadow, S., Brown, C. D., Chanin, P., Copp, G. H., Cowx, I. G., Grogan, A., Hornby, D. D., Huggett, D., Kelly, M. G., Naura, M., …Siriwardena, G. M. (2018). Small Water Bodies in Great Britain and Ireland: Ecosystem function, human-generated degradation, and options for restorative action. The Science of the total environment, 645, 1598-1616. https://doi.org/10.1016/j.scitotenv.2018.07.243

© 2018 Small, 1st and 2nd-order, headwater streams and ponds play essential roles in providing natural flood control, trapping sediments and contaminants, retaining nutrients, and maintaining biological diversity, which extend into downstream reaches... Read More about Small Water Bodies in Great Britain and Ireland: Ecosystem function, human-generated degradation, and options for restorative action.

Overcoming the dichotomy of implementing societal flood risk management while conserving instream fish habitat – A long-term study from a highly modified urban river (2018)
Journal Article
Angelopoulos, N. V., Harvey, J. P., Bolland, J. D., Nunn, A. D., Noble, R. A., Smith, M. A., Taylor, M. J., Masters, J. E., Moxon, J., & Cowx, I. G. (2018). Overcoming the dichotomy of implementing societal flood risk management while conserving instream fish habitat – A long-term study from a highly modified urban river. Journal of environmental management, 224, 69-76. https://doi.org/10.1016/j.jenvman.2018.07.030

Flood Risk Management (FRM) is often essential to reduce the risk of flooding to properties and infrastructure in urban landscapes, but typically degrades the habitats required by many aquatic animals for foraging, refuge and reproduction. This confl... Read More about Overcoming the dichotomy of implementing societal flood risk management while conserving instream fish habitat – A long-term study from a highly modified urban river.

Visualization of diffusion limited antimicrobial peptide attack on supported lipid membranes (2018)
Journal Article
Heath, G. R., Harrison, P. L., Strong, P. N., Evans, S. D., & Miller, K. (2018). Visualization of diffusion limited antimicrobial peptide attack on supported lipid membranes. Soft matter, 14(29), 6146-6154. https://doi.org/10.1039/c8sm00707a

Understanding the mechanism of action of antimicrobial peptides (AMP) is fundamental to the development and design of peptide based antimicrobials. Utilizing fast-scan atomic force microscopy (AFM) we detail the attack of an AMP on both prototypical... Read More about Visualization of diffusion limited antimicrobial peptide attack on supported lipid membranes.

Mu-DNA: a modular universal DNA extraction method adaptable for a wide range of sample types (2018)
Journal Article
Sellers, G. S., Di Muri, C., Gómez, A., & Hänfling, B. (2018). Mu-DNA: a modular universal DNA extraction method adaptable for a wide range of sample types. Metabarcoding and Metagenomics, 2, e24556. https://doi.org/10.3897/mbmg.2.24556

Efficient DNA extraction is fundamental to molecular studies. However, commercial kits are expensive when a large number of samples need to be processed. Here we present a simple, modular and adaptable DNA extraction ‘toolkit’ for the isolation of hi... Read More about Mu-DNA: a modular universal DNA extraction method adaptable for a wide range of sample types.

In-situ hydrogen generation from 1,2,3,4-tetrahydronaphthalene for catalytic conversion of oleic acid to diesel fuel hydrocarbons: Parametric studies using Response Surface Methodology approach (2018)
Journal Article
Cheah, K. W., Yusup, S., Kyriakou, G., Ameen, M., Taylor, M. J., Nowakowski, D. J., Bridgwater, A. V., & Uemura, Y. (2019). In-situ hydrogen generation from 1,2,3,4-tetrahydronaphthalene for catalytic conversion of oleic acid to diesel fuel hydrocarbons: Parametric studies using Response Surface Methodology approach. International Journal of Hydrogen Energy, 44(37), 20678-20689. https://doi.org/10.1016/j.ijhydene.2018.05.112

This work reported a new strategy in producing synthetic diesel hydrocarbons from a mono-unsaturated fatty acid model compound, oleic acid and replacing high pressure molecular hydrogen with a hydrogen-rich donor solvent, 1,2,3,4–tetrahydronaphthalen... Read More about In-situ hydrogen generation from 1,2,3,4-tetrahydronaphthalene for catalytic conversion of oleic acid to diesel fuel hydrocarbons: Parametric studies using Response Surface Methodology approach.

The effect of filtration method on the efficiency of environmental DNA capture and quantification via metabarcoding (2018)
Journal Article
Li, J., Lawson Handley, L. J., Read, D. S., & Hänfling, B. (2018). The effect of filtration method on the efficiency of environmental DNA capture and quantification via metabarcoding. Molecular Ecology Resources, 18(5), 1102-1114. https://doi.org/10.1111/1755-0998.12899

© 2018 John Wiley & Sons Ltd. Environmental DNA (eDNA) is a promising tool for rapid and noninvasive biodiversity monitoring. eDNA density is low in environmental samples, and a capture method, such as filtration, is often required to concentrate e... Read More about The effect of filtration method on the efficiency of environmental DNA capture and quantification via metabarcoding.

Win, win, win: Low cost baffle fish pass provides improved passage efficiency, reduced passage time and broadened passage flows over a low-head weir (2018)
Journal Article
Dodd, J. R., Cowx, I. G., & Bolland, J. D. (2018). Win, win, win: Low cost baffle fish pass provides improved passage efficiency, reduced passage time and broadened passage flows over a low-head weir. Ecological engineering, 120(September 2018), 68-75. https://doi.org/10.1016/j.ecoleng.2018.05.028

The number of low-head barriers to fish migration far outweighs the number of large magnitude barriers and thus the cumulative negative impact on fish communities could also be far greater. Removal of man-made obstructions to fish migration is the mo... Read More about Win, win, win: Low cost baffle fish pass provides improved passage efficiency, reduced passage time and broadened passage flows over a low-head weir.

Needle in a haystack? A comparison of eDNA metabarcoding and targeted qPCR for detection of the great crested newt (Triturus cristatus) (2018)
Journal Article
Harper, L. R., Lawson Handley, L., Hahn, C., Boonham, N., Rees, H. C., Gough, K. C., Lewis, E., Adams, I. P., Brotherton, P., Phillips, S., & Hänfling, B. (2018). Needle in a haystack? A comparison of eDNA metabarcoding and targeted qPCR for detection of the great crested newt (Triturus cristatus). Ecology and Evolution, 8(12), 6330-6341. https://doi.org/10.1002/ece3.4013

Environmental DNA (eDNA) analysis is a rapid, cost‐effective, non‐invasive biodiversity monitoring tool which utilises DNA left behind in the environment by organisms for species detection. The method is used as a species‐specific survey tool for rar... Read More about Needle in a haystack? A comparison of eDNA metabarcoding and targeted qPCR for detection of the great crested newt (Triturus cristatus).

Microplastics in mussels sampled from coastal waters and supermarkets in the United Kingdom (2018)
Journal Article
Li, J., Green, C., Reynolds, A., Shi, H., & Rotchell, J. M. (2018). Microplastics in mussels sampled from coastal waters and supermarkets in the United Kingdom. Environmental pollution, 241, 35-44. https://doi.org/10.1016/j.envpol.2018.05.038

Global contamination of the marine environment by plastic has led to the discovery of microplastics in a range of marine species, including those for human consumption. In this study, the presence of microplastics and other anthropogenic debris in se... Read More about Microplastics in mussels sampled from coastal waters and supermarkets in the United Kingdom.

Mixed phylogenetic signal in fish toxicity data across chemical classes (2018)
Journal Article
Hylton, A., Chiari, Y., Capellini, I., Barron, M. G., & Glaberman, S. (2018). Mixed phylogenetic signal in fish toxicity data across chemical classes. Ecological applications : a publication of the Ecological Society of America, 28(3), 605-611. https://doi.org/10.1002/eap.1698

Chemical use in society is growing rapidly and is one of the five major pressures on biodiversity worldwide. Since empirical toxicity studies of pollutants generally focus on a handful of model organisms, reliable approaches are needed to assess sens... Read More about Mixed phylogenetic signal in fish toxicity data across chemical classes.

Report on the species responses to climate-related factors, and their interactions. CERES (Climate change and European aquatic RESources) Project (EU, Horizon 2020 - BG-02-2015 Forecasting and anticipating effects of climate change on fisheries and aquaculture). Deliverable D2.1, April 2018. (2018)
Report
Catalan, I., Morales-Non, B., Dominguez, P., Kamermans, P., Auch, D., Reglero, P., …Peck, M. (2018). Report on the species responses to climate-related factors, and their interactions. CERES (Climate change and European aquatic RESources) Project (EU, Horizon 2020 - BG-02-2015 Forecasting and anticipating effects of climate change on fisheries and aquaculture). Deliverable D2.1, April 2018. EU: European Commission