Isolation and characterization of polymorphic microsatellite loci in the European bullhead Cottus gobio L. (Osteichthyes) and their applicability to related taxa

Englbrecht, C. C.; Largiadèr, C. R.; Hänfling, B.; Tautz, D.

doi:10.1046/j.1365-294X.1999.00778-6.x

Mitochondrial phylogeny of Arvicolinae using comprehensive taxonomic sampling yields new insights (2008)
Journal Article
Buzan, E. V., Krystufek, B., Hänfling, B., & Hutchinson, W. F. (2008). Mitochondrial phylogeny of Arvicolinae using comprehensive taxonomic sampling yields new insights. Biological journal of the Linnean Society, 94(4), 825-835. https://doi.org/10.1111/j.1095-8312.2008.01024.x

Comprehensive taxonomic sampling can vastly improve the accuracy of phylogenetic reconstruction. Here, we present the most inclusive phylogenetic analysis of Arvicolinae (Mammalia, Rodentia) to date, combining all published cytochrome b gene sequence... Read More about Mitochondrial phylogeny of Arvicolinae using comprehensive taxonomic sampling yields new insights.

Understanding the establishment success of non-indigenous fishes: lessons from population genetics (2007)
Journal Article
Hänfling, B. (2007). Understanding the establishment success of non-indigenous fishes: lessons from population genetics. Journal of fish biology, 71(SUPPL. D), 115-135. https://doi.org/10.1111/j.1095-8649.2007.01685.x

During the last 10 years, an increasing number of studies have explored evolutionary aspects ofbiological invasions. It is becoming increasingly clear that evolutionary processes play animportant role during the establishment of non-native species. G... Read More about Understanding the establishment success of non-indigenous fishes: lessons from population genetics.

The guppy as a conservation model: Implications of parasitism and inbreeding for reintroduction success (2007)
Journal Article
Van Oosterhout, C., Smith, A. M., Hänfling, B., Ramnarine, I. W., Mohammed, R. S., & Cable, J. (2007). The guppy as a conservation model: Implications of parasitism and inbreeding for reintroduction success. Conservation Biology, 21(6), 1573-1583. https://doi.org/10.1111/j.1523-1739.2007.00809.x

Ex situ conservation is of increasing importance to prevent the extinction of endangered animals in the wild. Despite low success rates of reintroduction programs few researchers have investigated empirically the efficacy of captive breeding regimes... Read More about The guppy as a conservation model: Implications of parasitism and inbreeding for reintroduction success.

Recent evolution of alternative reproductive modes in the 'living fossil' Triops cancriformis (2007)
Journal Article
Zierold, T., Haenfling, B., & Gomez, A. (2007). Recent evolution of alternative reproductive modes in the 'living fossil' Triops cancriformis. BMC evolutionary biology, 7(161), 1-12. https://doi.org/10.1186/1471-2148-7-161

Background: The Notostraca is a small but ancient crustacean order with a contrasting combination of a conservative morphology and a wide range of reproductive modes. The tadpole shrimp Triops cancriformis, includes bisexual - the putatively ancestra... Read More about Recent evolution of alternative reproductive modes in the 'living fossil' Triops cancriformis.

Phylogeography of the rare Balkan endemic Martino's vole, Dinaromys bogdanovi, reveals strong differentiation within the western Balkan Peninsula (2007)
Journal Article
Krystufek, B., Buzan, E. V., Hutchinson, W. F., & Hänfling, B. (2007). Phylogeography of the rare Balkan endemic Martino's vole, Dinaromys bogdanovi, reveals strong differentiation within the western Balkan Peninsula. Molecular ecology, 16(6), 1221-1232. https://doi.org/10.1111/j.1365-294X.2007.03235.x

The spatial genetic structure of Martino's vole, a rare palaeoendemic species of the western Balkans, was investigated using DNA isolated from archived museum samples. The study was based on partial sequencing (555 bp) of the mitochondrial cytochrome... Read More about Phylogeography of the rare Balkan endemic Martino's vole, Dinaromys bogdanovi, reveals strong differentiation within the western Balkan Peninsula.

Genetic population structure and contemporary dispersal patterns of a recent European invader, the Chinese mitten crab, Eriocheir sinensis (2006)
Journal Article
Herborg, L. M., Weetman, D., Van Oosterhout, C., & Hänfling, B. (2007). Genetic population structure and contemporary dispersal patterns of a recent European invader, the Chinese mitten crab, Eriocheir sinensis. Molecular ecology, 16(2), 231-242. https://doi.org/10.1111/j.1365-294x.2006.03133.x

Genetic studies of recently established populations are challenging because the assumption of equilibrium underlying many analyses is likely to be violated. Using microsatellites, we investigated determinants of genetic structure and migration among... Read More about Genetic population structure and contemporary dispersal patterns of a recent European invader, the Chinese mitten crab, Eriocheir sinensis.

Concordant genetic estimators of migration reveal anthropogenically enhanced source-sink population structure in the River Sculpin, Cottus gobio (2006)
Journal Article
Hänfling, B., & Weetman, D. (2006). Concordant genetic estimators of migration reveal anthropogenically enhanced source-sink population structure in the River Sculpin, Cottus gobio. Genetics, 173(3), 1487-1501. https://doi.org/10.1534/genetics.105.054296

River systems are vulnerable to natural and anthropogenic habitat fragmentation and will often harbor populations deviating markedly from simplified theoretical models. We investigated fine-scale population structure in the sedentary river fish Cottu... Read More about Concordant genetic estimators of migration reveal anthropogenically enhanced source-sink population structure in the River Sculpin, Cottus gobio.

Phylogeography of the cyprinid Squalius aradensis and implications for conservation of the endemic freshwater fauna of southern Portugal (2005)
Journal Article
Mesquita, N., Hänfling, B., Carvalho, G. R., & Coelho, M. M. (2005). Phylogeography of the cyprinid Squalius aradensis and implications for conservation of the endemic freshwater fauna of southern Portugal. Molecular ecology, 14(7), 1939-1954. https://doi.org/10.1111/j.1365-294X.2005.02569.x

The Iberian cyprinid fauna, characterized by the presence of numerous endemic species, has suffered from significant habitat degradation. The critically endangered Squalius aradensis is restricted to small drainages of southern Portugal, habitats tha... Read More about Phylogeography of the cyprinid Squalius aradensis and implications for conservation of the endemic freshwater fauna of southern Portugal.

A molecular approach to detect hybridisation between crucian carp (Carassius carassius) and non-indigenous carp species (Carassius spp. and Cyprinus carpio) (2005)
Journal Article
Hänfling, B., Bolton, P., Harley, M., & Carvalho, G. R. (2005). A molecular approach to detect hybridisation between crucian carp (Carassius carassius) and non-indigenous carp species (Carassius spp. and Cyprinus carpio). Freshwater biology, 50(3), 403-417. https://doi.org/10.1111/j.1365-2427.2004.01330.x

1. Releases of non-native fish into the wild is an increasing problem posing considerable ecological and genetic threats through direct competition and hybridisation. 2. We employed six microsatellite markers to identify first generation hybrids and... Read More about A molecular approach to detect hybridisation between crucian carp (Carassius carassius) and non-indigenous carp species (Carassius spp. and Cyprinus carpio).

Impact of habitat fragmentation on genetic population structure of roach, Rutilus rutilus, in a riparian ecosystem (2004)
Journal Article
Hänfling, B., Durka, W., & Brandl, R. (2004). Impact of habitat fragmentation on genetic population structure of roach, Rutilus rutilus, in a riparian ecosystem. Conservation genetics, 5(2), 247-257. https://doi.org/10.1023/B%3ACOGE.0000030008.20492.2c

During the last 200 years, the riparian ecosystem along major rivers has been reduced to a few scattered remnants. Important elements of the riparian ecosystem are water bodies which were originally connected to the main river channel by annual flood... Read More about Impact of habitat fragmentation on genetic population structure of roach, Rutilus rutilus, in a riparian ecosystem.

Isolation and characterization of polymorphic microsatellite loci in the endangered Portuguese freshwater fish Squalius aradensis (Cyprinidae) (2003)
Journal Article
Mesquita, N., Cunha, C., Hänfling, B., Carvalho, G. R., Zé-Zé, L., Tenreiro, R., & Coelho, M. M. (2003). Isolation and characterization of polymorphic microsatellite loci in the endangered Portuguese freshwater fish Squalius aradensis (Cyprinidae). Molecular ecology notes, 3(4), 572-574. https://doi.org/10.1046/j.1471-8286.2003.00515.x

Here we describe the isolation and characterization of six polymorphic microsatellite loci for Squalius aradensis. The number of observed alleles per locus ranged from three to 16 and the observed heterozygosity from 0.22 to 0.95. These primers will... Read More about Isolation and characterization of polymorphic microsatellite loci in the endangered Portuguese freshwater fish Squalius aradensis (Cyprinidae).

Characterization of microsatellite loci for the Chinese mitten crab, Eriocheir sinensis (2002)
Journal Article
Hänfling, B., & Weetman, D. (2003). Characterization of microsatellite loci for the Chinese mitten crab, Eriocheir sinensis. Molecular ecology notes, 3(1), 15-17. https://doi.org/10.1046/j.1471-8286.2003.00336.x

The Chinese mitten crab, Eriocheir sinensis is an important human food source in Asia and causes considerable ecological and economical damage as a recent invader of North America and Europe. Here we report the isolation and characterization of 12 hi... Read More about Characterization of microsatellite loci for the Chinese mitten crab, Eriocheir sinensis.

mt-DNA sequences and possible invasion pathways of the Chinese mitten crab (2002)
Journal Article
Hänfling, B., Carvalho, G. R., & Brandl, R. (2002). mt-DNA sequences and possible invasion pathways of the Chinese mitten crab. Marine ecology progress series, 238, 307-310. https://doi.org/10.3354/meps238307

The Chinese mitten crab Eriocheir sinensis is an invasive species that inflicts considerable economical and ecological damage in European and American freshwaters. Sequence variation at the mitochondrial COI gene was investigated from Chinese, Europe... Read More about mt-DNA sequences and possible invasion pathways of the Chinese mitten crab.

Isolation and characterization of polymorphic microsatellite loci in the European bullhead Cottus gobio L. (Osteichthyes) and their applicability to related taxa (1999)
Journal Article
Englbrecht, C. C., Largiadèr, C. R., Hänfling, B., & Tautz, D. (1999). Isolation and characterization of polymorphic microsatellite loci in the European bullhead Cottus gobio L. (Osteichthyes) and their applicability to related taxa. Molecular ecology, 8(11), 1966-1969. https://doi.org/10.1046/j.1365-294X.1999.00778-6.x

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